Paper Detail

Towards a Medical AI Scientist

Hongtao Wu, Boyun Zheng, Dingjie Song, Yu Jiang, Jianfeng Gao, Lei Xing, Lichao Sun, Yixuan Yuan

huggingface Score 15.0

Published 2026-03-30 · First seen 2026-03-31

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Abstract

Autonomous systems that generate scientific hypotheses, conduct experiments, and draft manuscripts have recently emerged as a promising paradigm for accelerating discovery. However, existing AI Scientists remain largely domain-agnostic, limiting their applicability to clinical medicine, where research is required to be grounded in medical evidence with specialized data modalities. In this work, we introduce Medical AI Scientist, the first autonomous research framework tailored to clinical autonomous research. It enables clinically grounded ideation by transforming extensively surveyed literature into actionable evidence through clinician-engineer co-reasoning mechanism, which improves the traceability of generated research ideas. It further facilitates evidence-grounded manuscript drafting guided by structured medical compositional conventions and ethical policies. The framework operates under 3 research modes, namely paper-based reproduction, literature-inspired innovation, and task-driven exploration, each corresponding to a distinct level of automated scientific inquiry with progressively increasing autonomy. Comprehensive evaluations by both large language models and human experts demonstrate that the ideas generated by the Medical AI Scientist are of substantially higher quality than those produced by commercial LLMs across 171 cases, 19 clinical tasks, and 6 data modalities. Meanwhile, our system achieves strong alignment between the proposed method and its implementation, while also demonstrating significantly higher success rates in executable experiments. Double-blind evaluations by human experts and the Stanford Agentic Reviewer suggest that the generated manuscripts approach MICCAI-level quality, while consistently surpassing those from ISBI and BIBM. The proposed Medical AI Scientist highlights the potential of leveraging AI for autonomous scientific discovery in healthcare.

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BibTeX

@misc{wu2026medical,
  title = {Towards a Medical AI Scientist},
  author = {Hongtao Wu and Boyun Zheng and Dingjie Song and Yu Jiang and Jianfeng Gao and Lei Xing and Lichao Sun and Yixuan Yuan},
  year = {2026},
  abstract = {Autonomous systems that generate scientific hypotheses, conduct experiments, and draft manuscripts have recently emerged as a promising paradigm for accelerating discovery. However, existing AI Scientists remain largely domain-agnostic, limiting their applicability to clinical medicine, where research is required to be grounded in medical evidence with specialized data modalities. In this work, we introduce Medical AI Scientist, the first autonomous research framework tailored to clinical autono},
  url = {https://huggingface.co/papers/2603.28589},
  keywords = {autonomous research framework, clinical autonomous research, clinician-engineer co-reasoning mechanism, evidence-grounded manuscript drafting, structured medical compositional conventions, ethical policies, paper-based reproduction, literature-inspired innovation, task-driven exploration, large language models, human experts, executable experiments, MICCAI-level quality, ISBI, BIBM, huggingface daily},
  eprint = {2603.28589},
  archiveprefix = {arXiv},
}

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